Gene: AT5G43760 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G43760
Transcript Identifier
AT5G43760.1
Gene Type
Coding gene
Location
Chr5 : 17585903-17588486 : positive

Family

Gene family
HOM04M000109
(779 genes in 28 species)
specific family
Subfamily
ORTHO04M000066
(666 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
3-ketoacyl-CoA synthase 20
Curated Summary
Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
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Identifiers

Type Value
symbolKCS20
tidAT5G43760.1
UniProtQ9FG87

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152 IEAInterPrometabolic process
GO:0006633 IEAUniProtfatty acid biosynthetic process1
GO:0009409 IEPUniProtresponse to cold1
GO:0009416 IEPUniProtresponse to light stimulus1
GO:0010345 IEAPLAZA Integrative Orthologysuberin biosynthetic processAT1G04220
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT1G04220
GO:0006970 IEAPLAZA Integrative Orthologyresponse to osmotic stressAT1G04220

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0016747 IEAInterProtransferase activity, transferring acyl groups other than amino-acyl groups
GO:0102336 IEAUniProt3-oxo-arachidoyl-CoA synthase activity1
GO:0102337 IEAUniProt3-oxo-cerotoyl-CoA synthase activity1
GO:0102338 IEAUniProt3-oxo-lignoceronyl-CoA synthase activity1
GO:0009922 IDAUniProtfatty acid elongase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005634 ISMGene Ontologynucleus1
GO:0016021 IEAUniProtintegral component of membrane1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016039Thiolase-like
IPR012392Very-long-chain 3-ketoacyl-CoA synthase
IPR0137473-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal
IPR013601FAE1/Type III polyketide synthase-like protein

Mapman id Description
5.1.6.1.1.Lipid metabolism.fatty acid biosynthesis.endoplasmic reticulum-localized fatty acid elongase (FAE) system.fatty acid elongation complex.3-ketoacyl-CoA synthase (KCS)
No SignalP domains detected for this gene.