PLAZA 4.0 Monocots gene overview : AT5G43170

Gene: AT5G43170 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G43170
Transcript Identifier: AT5G43170.1
Gene Type: Coding gene
Location: Chr5 : 17331050-17331631 : negative

Family

Gene family: HOM04M000212
(444 genes in 26 species)
specific family
Subfamily: ORTHO04M000724
(153 genes in 23 species)
specific family

Descriptions

Description: zinc-finger protein 3

Curated Summary: Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.

Identifiers

Type	Value
Alias	AZF3,zinc-finger protein 3
symbol	ZF3
tid	AT5G43170.1
UniProt	Q9SSW0

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006351	IEA	UniProt	transcription, DNA-templated	1
GO:0009409	IEP	UniProt	response to cold	1
GO:0042538	IEP	UniProt	hyperosmotic salinity response	1
GO:0045892	IDA	UniProt	negative regulation of transcription, DNA-templated	1
GO:0010200	IEP	UniProt	response to chitin	1
GO:0010117	IEA	PLAZA Integrative Orthology	photoprotection	AT1G27730
GO:0015979	IEA	PLAZA Integrative Orthology	photosynthesis	AT1G27730
GO:0071289	IEA	PLAZA Tree-based Orthology	cellular response to nickel ion	AT2G37430
GO:0048235	IEA	PLAZA Tree-based Orthology	pollen sperm cell differentiation	AT4G35280
GO:0009737	IEA	PLAZA Integrative Orthology	response to abscisic acid	AT1G27730
GO:0006979	IEA	PLAZA Integrative Orthology	response to oxidative stress	AT1G27730
GO:0009414	IEA	PLAZA Integrative Orthology	response to water deprivation	AT1G27730
GO:0009555	IEA	PLAZA Tree-based Orthology	pollen development	AT3G10470
GO:0006355	IEA	PLAZA Tree-based Orthology	regulation of transcription, DNA-templated	AT4G35280
GO:0009644	IEA	PLAZA Integrative Orthology	response to high light intensity	AT1G27730
GO:0009611	IEA	PLAZA Integrative Orthology	response to wounding	AT1G27730
GO:0009793	IEA	PLAZA Tree-based Orthology	embryo development ending in seed dormancy	AT3G19580
GO:0055062	IEA	PLAZA Integrative Orthology	phosphate ion homeostasis	AT5G04340
GO:0009651	IEA	PLAZA Integrative Orthology	response to salt stress	AT1G27730
GO:2000280	IEA	PLAZA Integrative Orthology	regulation of root development	AT5G04340
GO:0035264	IEA	PLAZA Integrative Orthology	multicellular organism growth	AT1G27730

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003676	ISS, IEA	Gene Ontology	nucleic acid binding	1
GO:0008270	ISS	Gene Ontology	zinc ion binding	1
GO:0046872	IEA	UniProt	metal ion binding	1
GO:0003677	ISS	UniProt	DNA binding	1
GO:0003700	ISS	UniProt	transcription factor activity, sequence-specific DNA binding	1
GO:0043565	IDA	UniProt	sequence-specific DNA binding	1
GO:0005515	IPI	Gene Ontology	protein binding	1
GO:0001047	IEA	PLAZA Integrative Orthology	core promoter binding	AT5G04340
GO:0044212	IEA	PLAZA Integrative Orthology	transcription regulatory region DNA binding	AT5G04340

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IDA, ISM, ISS,	UniProt	nucleus	1 2 3

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013087	Zinc finger C2H2-type

Mapman id	Description
15.5.15	.RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)

No SignalP domains detected for this gene.