Gene: AT5G43040 (Arabidopsis thaliana)

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Gene Identifier
AT5G43040
Transcript Identifier
AT5G43040.1
Gene Type
Coding gene
Location
Chr5 : 17263965-17265620 : negative

Family

Gene family
HOM04M000681
(188 genes in 7 species)
specific family
Subfamily
ORTHO04M000835
(138 genes in 3 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
Cysteine/Histidine-rich C1 domain family protein
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Identifiers

Type Value
tidAT5G43040.1
UniProtQ9FMI0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0035556 IEAInterProintracellular signal transduction
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT5G59920
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT4G01350
GO:2000033 IEAPLAZA Integrative Orthologyregulation of seed dormancy processAT3G27490
GO:0010029 IEAPLAZA Integrative Orthologyregulation of seed germinationAT3G27490
GO:0055046 IEAPLAZA Tree-based OrthologymicrogametogenesisAT2G17740
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT5G17960
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT2G13950
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT5G17960
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT5G17960
GO:0009411 IEAPLAZA Integrative Orthologyresponse to UVAT5G17960
GO:0009561 IEAPLAZA Integrative OrthologymegagametogenesisAT1G55420
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT4G10560
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G17960

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAGene Ontologyzinc ion binding1
GO:0042393 IEAPLAZA Integrative Orthologyhistone bindingAT3G27490
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G27490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G13760
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT5G59920
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G35610
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT4G13130

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR004146DC1
IPR001965Zinc finger, PHD-type
IPR002219Protein kinase C-like, phorbol ester/diacylglycerol-binding domain

Mapman id Description
35.2not assigned.not annotated
No SignalP domains detected for this gene.