Gene: AT5G42990 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G42990
Transcript Identifier
AT5G42990.1
Gene Type
Coding gene
Location
Chr5 : 17244206-17245904 : negative

Family

Gene family
HOM04M000061
(1235 genes in 29 species)
specific family
Subfamily
ORTHO04M002269
(74 genes in 28 species)
specific family

Descriptions

Description
ubiquitin-conjugating enzyme 18
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Identifiers

Type Value
symbolUBC18
tidAT5G42990.1
UniProtQ9FMM0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000209 IBAUniProtprotein polyubiquitination1
GO:0043161 IBAUniProtproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0006511 TASGene Ontologyubiquitin-dependent protein catabolic process1
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT1G45050
GO:0009965 IEAPLAZA Integrative Orthologyleaf morphogenesisAT1G45050
GO:0009910 IEAPLAZA Integrative Orthologynegative regulation of flower developmentAT1G45050

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 ISSGene Ontologyubiquitin-protein transferase activity1
GO:0005524 IEAUniProtATP binding1
GO:0031625 IBAUniProtubiquitin protein ligase binding1
GO:0061630 IBAUniProtubiquitin protein ligase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBA, ISM, UniProtnucleus1 2
GO:0005737 IBAUniProtcytoplasm1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000608Ubiquitin-conjugating enzyme E2
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR023313Ubiquitin-conjugating enzyme, active site

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.