Gene: AT5G42190 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G42190
Transcript Identifier
AT5G42190.1
Gene Type
Coding gene
Location
Chr5 : 16854495-16855516 : negative

Family

Gene family
HOM04M000290
(360 genes in 29 species)
specific family
Subfamily
ORTHO04M000184
(347 genes in 29 species)
specific family

Descriptions

Description
E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Curated Summary
Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.
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Identifiers

Type Value
AliasASK2,Arabidopsis SKP-like 2,SKP1B
tidAT5G42190.1
UniProtQ9FHW7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 TAS, IEAGene Ontologyubiquitin-dependent protein catabolic process1
GO:0007059 IEAGene Ontologychromosome segregation1
GO:0009734 IEAGene Ontologyauxin-activated signaling pathway1
GO:0009873 IEAGene Ontologyethylene-activated signaling pathway1
GO:0016032 IEAGene Ontologyviral process1
GO:0016567 IEAGene Ontologyprotein ubiquitination1
GO:0009793 IGIGene Ontologyembryo development ending in seed dormancy1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 ISSGene Ontologyubiquitin-protein transferase activity1
GO:0005515 IPIGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISMGene Ontologynucleus1 2
GO:0005737 NASGene Ontologycytoplasm1
GO:0019005 NASGene OntologySCF ubiquitin ligase complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016073SKP1 component, POZ domain
IPR016072SKP1 component, dimerisation
IPR016897S-phase kinase-associated protein 1
IPR001232S-phase kinase-associated protein 1-like
IPR011333SKP1/BTB/POZ domain

Mapman id Description
19.2.2.8.1.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.target protein binding component SKP1/ASK1
No SignalP domains detected for this gene.