Gene: AT5G42080 (Arabidopsis thaliana)

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Gene Identifier
AT5G42080
Transcript Identifier
AT5G42080.1
Gene Type
Coding gene
Location
Chr5 : 16820661-16824536 : negative

Family

Gene family
HOM04M000225
(426 genes in 29 species)
specific family
Subfamily
ORTHO04M000788
(143 genes in 29 species)
specific family

Descriptions

Description
dynamin-like protein
Curated Summary
Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.
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Identifiers

Type Value
AliasADL1A,ADL1,dynamin-like protein,AG68,DRP1A,DYNAMIN-RELATED PROTEIN 1A,RSW9,RADIAL SWELLING 9
symbolDL1
tidAT5G42080.1
UniProtP42697

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000266 IBAGene Ontologymitochondrial fission1
GO:0000911 IGIGene Ontologycytokinesis by cell plate formation1
GO:0009793 IGIGene Ontologyembryo development ending in seed dormancy1
GO:0009920 IGIGene Ontologycell plate formation involved in plant-type cell wall biogenesis1
GO:0010091 IMPGene Ontologytrichome branching1
GO:0010051 IMPGene Ontologyxylem and phloem pattern formation1
GO:0072583 IDAGene Ontologyclathrin-dependent endocytosis1
GO:0048766 IMPGene Ontologyroot hair initiation1 2
GO:2000114 IMPGene Ontologyregulation of establishment of cell polarity1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924 IEA, IDAUniProtGTPase activity1 2
GO:0005525 IEA, ISS, UniProtGTP binding1 2
GO:0008017 IBAGene Ontologymicrotubule binding1
GO:0005515 IPIGene Ontologyprotein binding1
GO:0043424 IPIGene Ontologyprotein histidine kinase binding1
GO:0030276 IDAGene Ontologyclathrin binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 ISMGene Ontologycytoplasm1
GO:0009524 IEAGene Ontologyphragmoplast1
GO:0009504 IDAGene Ontologycell plate1
GO:0005773 IDAGene Ontologyvacuole1
GO:0005874 IDAGene Ontologymicrotubule1
GO:0005886 IDAGene Ontologyplasma membrane1
GO:0005774 IDAGene Ontologyvacuolar membrane1
GO:0005829 IDAGene Ontologycytosol1
GO:0009506 IDAGene Ontologyplasmodesma1
GO:0009535 IDAGene Ontologychloroplast thylakoid membrane1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR022812Dynamin superfamily
IPR003130Dynamin GTPase effector
IPR000375Dynamin central domain
IPR019762Dynamin, GTPase region, conserved site
IPR030381Dynamin-type guanine nucleotide-binding (G) domain
IPR020850GTPase effector domain
IPR001401Dynamin, GTPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
22.1.7.1.Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.dynamin (DRP1)
No SignalP domains detected for this gene.