Gene: AT5G41190 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G41190
Transcript Identifier
AT5G41190.1
Gene Type
Coding gene
Location
Chr5 : 16487628-16490012 : negative

Family

Gene family
HOM04M004845
(39 genes in 29 species)
specific family

Descriptions

Description
RNA-binding NOB1-like protein
Curated Summary
Encodes a cytoplasmic protein with RNA endonuclease activity. Mutants display aberrant RNA processing and male and female gametophyte development.
Show more...

Identifiers

Type Value
AliasAtNOB1,NOB1
tidAT5G41190.1
UniProtQ9FLL1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000469 IDA, IEAGene Ontologycleavage involved in rRNA processing1
GO:0042274 IEAInterProribosomal small subunit biogenesis
GO:0030490 IBAGene Ontologymaturation of SSU-rRNA1
GO:0006364 IMPGene OntologyrRNA processing1
GO:0009553 IMPGene Ontologyembryo sac development1
GO:0009555 IMPGene Ontologypollen development1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004521 IDA, IEAGene Ontologyendoribonuclease activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0030688 IBAGene Ontologypreribosome, small subunit precursor1
GO:0005737 IDAGene Ontologycytoplasm1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029060PIN domain-like
IPR033411Ribonuclease, PIN domain
IPR014881Nin one binding (NOB1) Zn-ribbon-like
IPR017117Ribonuclease Nob1, eukaryote

Mapman id Description
17.1.1.8.3.Protein biosynthesis.ribosome biogenesis.rRNA biosynthesis.ITS1 rRNA removal.pre-rRNA processing endonuclease (NOB1)
17.1.3.2.1.6.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.endonuclease (NOB1)
No SignalP domains detected for this gene.