Gene: AT5G41010 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G41010
Transcript Identifier
AT5G41010.1
Gene Type
Coding gene
Location
Chr5 : 16424050-16424921 : positive

Family

Gene family
HOM04M003522
(48 genes in 27 species)
specific family

Descriptions

Description
DNA directed RNA polymerase, 7 kDa subunit
Curated Summary
Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB12.
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Identifiers

Type Value
NoteDNA directed RNA polymerase, 7 kDa subunit
symbolNRPB12
tidAT5G41010.1
UniProtQ9FLM8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 ISS, IEAGene Ontologytranscription, DNA-templated1
GO:0006360 IEAUniProttranscription from RNA polymerase I promoter
GO:0006366 IEAUniProttranscription from RNA polymerase II promoter
GO:0006383 IEAUniProttranscription from RNA polymerase III promoter

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, ISS, UniProtDNA binding1 2
GO:0003899 IEA, ISSUniProtDNA-directed 5'-3' RNA polymerase activity1
GO:0001054 IBAGene OntologyRNA polymerase I activity1
GO:0001055 IBAGene OntologyRNA polymerase II activity1
GO:0001056 IBAGene OntologyRNA polymerase III activity1
GO:0046872 IEAUniProtmetal ion binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISSGene Ontologynucleus1
GO:0005666 IBAUniProtDNA-directed RNA polymerase III complex1
GO:0005736 IBAUniProtDNA-directed RNA polymerase I complex1
GO:0000418 IDA, IPI, UniProtDNA-directed RNA polymerase IV complex1 2
GO:0000419 IDA, IPI, UniProtDNA-directed RNA polymerase V complex1 2
GO:0005665 IDA, IPI, UniProtDNA-directed RNA polymerase II, core complex1 2

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006591RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4
IPR029040RNA polymerase subunit RPABC4/transcription elongation factor Spt4

Mapman id Description
15.1.6.10.RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 12
No SignalP domains detected for this gene.