Gene: AT5G39860 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G39860
Transcript Identifier
AT5G39860.1
Gene Type
Coding gene
Location
Chr5 : 15957689-15958303 : positive

Family

Gene family
HOM04M000827
(161 genes in 24 species)
specific family
Subfamily
ORTHO04M003380
(56 genes in 22 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
basic helix-loop-helix (bHLH) DNA-binding family protein
Curated Summary
Encodes PRE1 (PACLOBUTRAZOL RESISTANCE1). PRE1 and IBH1 form a pair of antagonistic HLH/bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation. BNQ1 is directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time.
Show more...

Identifiers

Type Value
AliasBHLH136,BASIC HELIX-LOOP-HELIX PROTEIN 136,BNQ1,BANQUO 1
full_namePACLOBUTRAZOL RESISTANCE1
symbolPRE1
tidAT5G39860.1
UniProtQ9FLE9

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006355 IEAGene Ontologyregulation of transcription, DNA-templated1
GO:0009740 IEAUniProtgibberellic acid mediated signaling pathway1
GO:0009742 IEAUniProtbrassinosteroid mediated signaling pathway1
GO:0040008 IEAUniProtregulation of growth1
GO:0009741 IEPUniProtresponse to brassinosteroid1
GO:0009826 IMPUniProtunidimensional cell growth1
GO:0009640 IMPUniProtphotomorphogenesis1
GO:0048510 IMPUniProtregulation of timing of transition from vegetative to reproductive phase1
GO:0010086 IEAPLAZA Tree-based Orthologyembryonic root morphogenesisAT1G74500
GO:0080113 IEAPLAZA Tree-based Orthologyregulation of seed growthLOC_Os03g07510
GO:0009416 IEAPLAZA Tree-based Orthologyresponse to light stimulusAT1G26945

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAUniProtprotein dimerization activity1
GO:0003677 ISSGene OntologyDNA binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0005515 IPIGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmLOC_Os06g12210
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT5G15160

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.