Gene: AT5G39510 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G39510
Transcript Identifier
AT5G39510.1
Gene Type
Coding gene
Location
Chr5 : 15822035-15823591 : positive

Family

Gene family
HOM04M001551
(96 genes in 28 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
Vesicle transport v-SNARE family protein
Curated Summary
Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12.
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Identifiers

Type Value
AliasATVTI11,VESICLE TRANSPORT V-SNARE 11,ATVTI1A,ITT3,IMPAIRED TONOPLAST TRAFFIC 3,VTI11,VESICLE TRANSPORT V-SNARE 11,VTI1A,ZIG,ZIG1
full_nameSHOOT GRAVITROPSIM 4
symbolSGR4
tidAT5G39510.1
UniProtQ9SEL6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006886 IEAInterProintracellular protein transport
GO:0006810 IEAInterProtransport
GO:0016192 IEAInterProvesicle-mediated transport
GO:0006888 IBAUniProtER to Golgi vesicle-mediated transport1
GO:0006891 IBAUniProtintra-Golgi vesicle-mediated transport1
GO:0042147 IBAUniProtretrograde transport, endosome to Golgi1
GO:0048280 IBAUniProtvesicle fusion with Golgi apparatus1
GO:0006896 IGIGene OntologyGolgi to vacuole transport1
GO:0009630 IMPUniProtgravitropism1
GO:0006623 IMPUniProtprotein targeting to vacuole1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005484 IBA, IEA, UniProtSNAP receptor activity1
GO:0000149 IBAUniProtSNARE binding1
GO:0005515 IPIGene Ontologyprotein binding1
GO:0004872 TASGene Ontologyreceptor activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005794 IEAInterProGolgi apparatus
GO:0005789 IBAUniProtendoplasmic reticulum membrane1
GO:0012507 IBAUniProtER to Golgi transport vesicle membrane1
GO:0016021 IEAUniProtintegral component of membrane1
GO:0031201 IBAUniProtSNARE complex1
GO:0031902 IBAUniProtlate endosome membrane1
GO:0005770 IDA, TAS, UniProtlate endosome1 2
GO:0005802 IDA, TAS, UniProttrans-Golgi network1 2
GO:0030140 IDAGene Ontologytrans-Golgi network transport vesicle1
GO:0005773 IDAUniProtvacuole1
GO:0000325 IDAUniProtplant-type vacuole1
GO:0005774 IDAUniProtvacuolar membrane1
GO:0005829 IEA, RCA, UniProtcytosol1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007705Vesicle transport v-SNARE, N-terminal
IPR027027GOSR2/Membrin/Bos1
IPR010989SNARE

Mapman id Description
22.7.2.1.Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qb-type SNARE components.VTI-group component
No SignalP domains detected for this gene.