Gene: AT5G38110 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G38110
Transcript Identifier
AT5G38110.1
Gene Type
Coding gene
Location
Chr5 : 15208643-15210064 : positive

Family

Gene family
HOM04M001105
(127 genes in 29 species)
specific family
Subfamily
ORTHO04M003329
(56 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
anti- silencing function 1b
Curated Summary
This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation. Its expression is regulated during cell cycle progression through E2F transcription factors.
Show more...

Identifiers

Type Value
AliasSGA01,SGA1
symbolASF1B
tidAT5G38110.1
UniProtQ9LS09

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006333 IEAUniProtchromatin assembly or disassembly1
GO:0006139 ISSGene Ontologynucleobase-containing compound metabolic process1
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006355 IEAUniProtregulation of transcription, DNA-templated1
GO:0016569 IEAUniProtcovalent chromatin modification1
GO:0009294 IMPUniProtDNA mediated transformation1
GO:0000724 IMPUniProtdouble-strand break repair via homologous recombination1
GO:0008361 IMPUniProtregulation of cell size1
GO:0010091 IMPUniProttrichome branching1
GO:0031567 IMPUniProtmitotic cell size control checkpoint1
GO:0051301 IMPUniProtcell division1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IPIGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISMIEA, UniProtnucleus1 2
GO:0005737 IDAUniProtcytoplasm1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR006818Histone chaperone ASF1-like

Mapman id Description
12.2.3.Chromatin organisation.histone chaperone activities.histone chaperone (ASF1)
No SignalP domains detected for this gene.