PLAZA 4.0 Monocots gene overview : AT5G37890

Gene: AT5G37890 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G37890
Transcript Identifier: AT5G37890.1
Gene Type: Coding gene
Location: Chr5 : 15090512-15091822 : negative

Family

Gene family: HOM04M000372
(304 genes in 27 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

Descriptions

Description: Protein with RING/U-box and TRAF-like domain

Curated Summary: Encodes an E3 protein ligase (based on a self-ubiquitination in vitro assay).

Identifiers

Type	Value
Alias	AtSINAL7,SINAL7,SINA like 7
tid	AT5G37890.1
UniProt	Q9FKD7

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006511	IEA, ISS	Gene Ontology	ubiquitin-dependent protein catabolic process	1 2
GO:0007275	IEA, ISS	Gene Ontology	multicellular organism development	1 2
GO:0016567	IDA, IEA	Gene Ontology	protein ubiquitination	1 2 3
GO:0009411	IEP	Gene Ontology	response to UV	1 2

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008270	IEA	Gene Ontology	zinc ion binding	1
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005515	IEA	InterPro	protein binding
GO:0061630	IDA	Gene Ontology	ubiquitin protein ligase activity	1 2

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IEA, ISM, ISS	Gene Ontology	nucleus	1 2 3
GO:0005886	IEA	PLAZA Integrative Orthology	plasma membrane	AT5G37900

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR004162	E3 ubiquitin-protein ligase SIN-like
IPR018121	Seven-in-absentia protein, TRAF-like domain
IPR001841	Zinc finger, RING-type
IPR013010	Zinc finger, SIAH-type
IPR013087	Zinc finger C2H2-type
IPR008974	TRAF-like

Mapman id	Description
19.2.2.1.5.3.5	.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SINA)

No SignalP domains detected for this gene.