Gene: AT5G37890 (Arabidopsis thaliana)

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Gene Identifier
AT5G37890
Transcript Identifier
AT5G37890.1
Gene Type
Coding gene
Location
Chr5 : 15090512-15091822 : negative

Family

Gene family
HOM04M000372
(304 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
Protein with RING/U-box and TRAF-like domain
Curated Summary
Encodes an E3 protein ligase (based on a self-ubiquitination in vitro assay).
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Identifiers

Type Value
AliasAtSINAL7,SINAL7,SINA like 7
tidAT5G37890.1
UniProtQ9FKD7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 IEA, ISSGene Ontologyubiquitin-dependent protein catabolic process1 2
GO:0007275 IEA, ISSGene Ontologymulticellular organism development1 2
GO:0016567 IDA, IEAGene Ontologyprotein ubiquitination1 2 3
GO:0009411 IEPGene Ontologyresponse to UV1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEAGene Ontologyzinc ion binding1
GO:0003676 IEAInterPronucleic acid binding
GO:0005515 IEAInterProprotein binding
GO:0061630 IDAGene Ontologyubiquitin protein ligase activity1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, ISSGene Ontologynucleus1 2 3
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT5G37900

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR004162E3 ubiquitin-protein ligase SIN-like
IPR018121Seven-in-absentia protein, TRAF-like domain
IPR001841Zinc finger, RING-type
IPR013010Zinc finger, SIAH-type
IPR013087Zinc finger C2H2-type
IPR008974TRAF-like

Mapman id Description
19.2.2.1.5.3.5.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SINA)
No SignalP domains detected for this gene.