Gene: AT5G37800 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G37800
Transcript Identifier
AT5G37800.1
Gene Type
Coding gene
Location
Chr5 : 15036197-15037574 : positive

Family

Gene family
HOM04M000054
(1357 genes in 27 species)
specific family
Subfamily
ORTHO04M000465
(202 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
RHD SIX-LIKE 1
Show more...

Identifiers

Type Value
AliasATRSL1,ARABIDOPSIS THALIANA RHD SIX-LIKE 1
symbolRSL1
tidAT5G37800.1
UniProtQ9FJ00

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006366 IBAGene Ontologytranscription from RNA polymerase II promoter1
GO:0006355 ISS, TASGene Ontologyregulation of transcription, DNA-templated1 2
GO:0032436 IBAUniProtpositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209 IBAUniProtprotein polyubiquitination
GO:0042787 IBAUniProtprotein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0010431 IMPUniProtseed maturation
GO:0048766 IEAPLAZA Integrative Orthologyroot hair initiationAT1G66470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAGene Ontologyprotein dimerization activity1
GO:0001046 IBAGene Ontologycore promoter sequence-specific DNA binding1
GO:0001228 IBAGene Ontologytranscriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1
GO:0003677 ISSGene OntologyDNA binding1
GO:0003700 ISSGene Ontologytranscription factor activity, sequence-specific DNA binding1
GO:0046872 IEAUniProtmetal ion binding
GO:0003676 IEAUniProtnucleic acid binding
GO:0031624 IBAUniProtubiquitin conjugating enzyme binding
GO:0061630 IDAUniProtubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBA, ISMGene Ontologynucleus1 2
GO:0005737 IBAUniProtcytoplasm
GO:0016021 IEAUniProtintegral component of membrane
GO:0000151 IBAUniProtubiquitin ligase complex
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G66470

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.