Gene: AT5G35600 (Arabidopsis thaliana)

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Gene Identifier
AT5G35600
Transcript Identifier
AT5G35600.1
Gene Type
Coding gene
Location
Chr5 : 13770121-13771712 : negative

Family

Gene family
HOM04M000721
(181 genes in 29 species)
specific family
Subfamily
ORTHO04M000710
(155 genes in 29 species)
specific family

Descriptions

Description
histone deacetylase7
Curated Summary
Encodes a histone deacetylase that is crucial for female gametophyte development and embryogenesis.
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Identifiers

Type Value
AliasAtHDA7
symbolHDA7
tidAT5G35600.1
UniProtQ9FH09

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016575 ISS, IEAGene Ontologyhistone deacetylation1
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006355 IEAUniProtregulation of transcription, DNA-templated1
GO:0009553 IMPUniProtembryo sac development1 2
GO:0009793 IMPUniProtembryo development ending in seed dormancy1 2
GO:0009845 IMPUniProtseed germination1 2
GO:0016458 IEAPLAZA Integrative Orthologygene silencingAT5G63110
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G63110
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G63110
GO:0016441 IEAPLAZA Integrative Orthologyposttranscriptional gene silencingAT5G63110
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT5G63110
GO:0010431 IEAPLAZA Integrative Orthologyseed maturationAT5G63110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004407 ISS, IEAGene Ontologyhistone deacetylase activity1
GO:0032041 IEAUniProtNAD-dependent histone deacetylase activity (H3-K14 specific)1
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G63110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, ISS, UniProtnucleus1 2 3
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G63110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023801Histone deacetylase domain
IPR000286Histone deacetylase superfamily
IPR003084Histone deacetylase

Mapman id Description
12.3.2.1.1.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase
No SignalP domains detected for this gene.