Gene: AT5G27680 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G27680
Transcript Identifier
AT5G27680.2
Gene Type
Coding gene
Location
Chr5 : 9794244-9798637 : negative

Family

Gene family
HOM04M000493
(239 genes in 28 species)
specific family
Subfamily
ORTHO04M007781
(33 genes in 23 species)
specific family

Descriptions

Description
RECQ helicase SIM
Curated Summary
DNA helicase
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Identifiers

Type Value
symbolRECQSIM
tidAT5G27680.2
UniProtQ9FT69

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006310 IEAUniProtDNA recombination
GO:0000724 IBAUniProtdouble-strand break repair via homologous recombination1
GO:0006281 IDAUniProtDNA repair1
GO:0032508 IDAGene OntologyDNA duplex unwinding1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAUniProtnucleic acid binding
GO:0005524 IEAUniProtATP binding1
GO:0005515 IEAInterProprotein binding
GO:0008026 IEA, ISS, UniProtATP-dependent helicase activity1
GO:0003677 IBAUniProtDNA binding1
GO:0009378 IBAUniProtfour-way junction helicase activity1
GO:0043140 IBAUniProtATP-dependent 3'-5' DNA helicase activity1
GO:0046872 IEAUniProtmetal ion binding1
GO:0043138 IDAUniProt3'-5' DNA helicase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBA, ISM, UniProtnucleus1 2
GO:0005694 IBAUniProtchromosome1
GO:0005737 IBAUniProtcytoplasm1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR032284ATP-dependent DNA helicase RecQ, zinc-binding domain
IPR001650Helicase, C-terminal
IPR011545DEAD/DEAH box helicase domain
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR015940Ubiquitin-associated domain
IPR009060UBA-like
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR004589DNA helicase, ATP-dependent, RecQ type

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.