PLAZA 4.0 Monocots gene overview : AT5G22950

Gene: AT5G22950 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G22950
Transcript Identifier: AT5G22950.1
Gene Type: Coding gene
Location: Chr5 : 7681380-7682720 : positive

Family

Gene family: HOM04M003282
(52 genes in 29 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: SNF7 family protein

Identifiers

Type	Value
symbol	VPS24.1
tid	AT5G22950.1
UniProt	Q9FFB3

Toolbox

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...the colinearity of this gene with other genomes.
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...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Browse

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0007034	IEA	Gene Ontology	vacuolar transport	1
GO:0015031	IEA	Gene Ontology	protein transport	1
GO:0016192	ISS	Gene Ontology	vesicle-mediated transport	1
GO:0070676	IDA	Gene Ontology	intralumenal vesicle formation	1 2

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IPI	Gene Ontology	protein binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1
GO:0000815	ISS	Gene Ontology	ESCRT III complex	1
GO:0005770	IDA	Gene Ontology	late endosome	1 2
GO:0005829	IDA	Gene Ontology	cytosol	1 2
GO:0010008	IDA	Gene Ontology	endosome membrane	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR005024	Snf7 family

Mapman id	Description
22.5.4.3.4	.Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.component VPS24

No SignalP domains detected for this gene.