Gene: AT5G22330 (Arabidopsis thaliana)

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Gene Identifier
AT5G22330
Transcript Identifier
AT5G22330.1
Gene Type
Coding gene
Location
Chr5 : 7391026-7394071 : negative

Family

Gene family
HOM04M001427
(103 genes in 29 species)
specific family
Subfamily
ORTHO04M004834
(43 genes in 29 species)
specific family

Descriptions

Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
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Identifiers

Type Value
AliasATTIP49A
full_nameRESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1
symbolRIN1
tidAT5G22330.1
UniProtQ9FMR9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009908 IEAUniProtflower development1
GO:0030154 IEAUniProtcell differentiation1
GO:0048507 IMPUniProtmeristem development1
GO:2000072 IMPUniProtregulation of defense response to fungus, incompatible interaction1
GO:0000492 IBAUniProtbox C/D snoRNP assembly
GO:0006338 IBAUniProtchromatin remodeling
GO:0016573 IBAUniProthistone acetylation
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043141 IEAUniProtATP-dependent 5'-3' DNA helicase activity1
GO:0003678 IEAInterProDNA helicase activity
GO:0005524 IEAUniProtATP binding1
GO:0005515 IPIGene Ontologyprotein binding1
GO:0004003 IBAUniProtATP-dependent DNA helicase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, UniProtnucleus1 2
GO:0009507 IDAUniProtchloroplast1
GO:0005730 IDAUniProtnucleolus1
GO:0005829 IDAUniProtcytosol1
GO:0031011 IBAUniProtIno80 complex
GO:0035267 IBAUniProtNuA4 histone acetyltransferase complex
GO:0097255 IBAUniProtR2TP complex
GO:0000812 IBAUniProtSwr1 complex

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027238RuvB-like
IPR010339TIP49, C-terminal
IPR003593AAA+ ATPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
12.4.7.Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared helicase (RVB)
No SignalP domains detected for this gene.