Gene: AT5G20680 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G20680
Transcript Identifier
AT5G20680.2
Gene Type
Coding gene
Location
Chr5 : 6999221-7001596 : positive

Family

Gene family
HOM04M000041
(1489 genes in 27 species)
specific family
Subfamily
ORTHO04M001629
(90 genes in 27 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
TRICHOME BIREFRINGENCE-LIKE 16
Curated Summary
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
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Identifiers

Type Value
symbolTBL16
tidAT5G20680.2
UniProtF4K5L5-2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0071554 IBAUniProtcell wall organization or biogenesis1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016413 IBAUniProtO-acetyltransferase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005794 IDAUniProtGolgi apparatus1
GO:0005768 IDAUniProtendosome1
GO:0005802 IDAUniProttrans-Golgi network1
GO:0016021 IEAUniProtintegral component of membrane

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR029962Trichome birefringence-like family
IPR029969Protein trichome birefringence-like 16
IPR026057PC-Esterase
IPR025846PMR5 N-terminal domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.