Gene: AT5G18000 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G18000
Transcript Identifier
AT5G18000.1
Gene Type
Coding gene
Location
Chr5 : 5960071-5961473 : negative

Family

Gene family
HOM04M011287
(7 genes in 1 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
VERDANDI
Curated Summary
Encodes VERDANDI (VDD), a putative transcription factor belonging to the reproductive meristem (REM) family. VDD is a direct target of the MADS domain ovule identity complex. Mutation in VDD affects embryo sac differentiation.
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Identifiers

Type Value
symbolVDD
tidAT5G18000.1
UniProtQ9FJG2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006355 IEA, ISS, UniProtregulation of transcription, DNA-templated1 2
GO:0009553 IMPGene Ontologyembryo sac development1
GO:0009567 IMPGene Ontologydouble fertilization forming a zygote and endosperm1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, ISS, UniProtDNA binding1 2
GO:0003700 ISSGene Ontologytranscription factor activity, sequence-specific DNA binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain

Mapman id Description
15.5.5.2.RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (REM)
No SignalP domains detected for this gene.