Gene: AT5G17800 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G17800
Transcript Identifier
AT5G17800.1
Gene Type
Coding gene
Location
Chr5 : 5877247-5879071 : positive

Family

Gene family
HOM04M000112
(760 genes in 29 species)
specific family

Descriptions

Description
myb domain protein 56
Curated Summary
Member of the R2R3 factor gene family that acts as a cell-specific repressor of quiescent center (QC) divisions in the primary root, acting through the BR signaling pathway. Works with BES1 to regulate QC division in the root.
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Identifiers

Type Value
AliasAtMYB56,myb domain protein 56,BRAVO,BRASSINOSTEROIDS AT VASCULAR AND ORGANIZING CENTER
symbolMYB56
tidAT5G17800.1
UniProtQ6R053

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter1
GO:0009742 IEAUniProtbrassinosteroid mediated signaling pathway1
GO:0030154 IBAUniProtcell differentiation1
GO:0006355 TASUniProtregulation of transcription, DNA-templated1
GO:0001935 IMPUniProtendothelial cell proliferation1 2
GO:0080060 IMPUniProtintegument development1 2
GO:0080113 IMPUniProtregulation of seed growth1 2
GO:0045893 IDAUniProtpositive regulation of transcription, DNA-templated1 2
GO:0051782 IMPUniProtnegative regulation of cell division1 2
GO:0071367 IEPUniProtcellular response to brassinosteroid stimulus1 2
GO:1904961 IMPUniProtquiescent center organization1 2
GO:0048579 IMPUniProtnegative regulation of long-day photoperiodism, flowering1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 ISS, IEAGene OntologyDNA binding1
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding1
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting1
GO:0003700 IDA, ISS, UniProttranscription factor activity, sequence-specific DNA binding1 2 3
GO:0001046 IDAUniProtcore promoter sequence-specific DNA binding1 2
GO:0005515 IPIGene Ontologyprotein binding1 2
GO:0042803 IDAUniProtprotein homodimerization activity1 2
GO:0043565 IPIUniProtsequence-specific DNA binding1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, UniProtnucleus1 2
GO:0005829 IDAUniProtcytosol1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.