Gene: AT5G16830 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G16830
Transcript Identifier
AT5G16830.1
Gene Type
Coding gene
Location
Chr5 : 5533076-5535152 : negative

Family

Gene family
HOM04M001602
(93 genes in 29 species)
specific family

Descriptions

Description
syntaxin of plants 21
Curated Summary
member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane.
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Identifiers

Type Value
AliasATPEP12,ATSYP21,PEP12,PEP12P
full_namesyntaxin of plants 21
symbolSYP21
tidAT5G16830.1
UniProtQ39233

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006886 TAS, IEAGene Ontologyintracellular protein transport1
GO:0016192 IEAInterProvesicle-mediated transport
GO:0006906 IBAUniProtvesicle fusion1
GO:0048278 IBAUniProtvesicle docking1
GO:0006896 TASUniProtGolgi to vacuole transport1
GO:0061025 TASGene Ontologymembrane fusion1
GO:0045324 IMPUniProtlate endosome to vacuole transport1
GO:0006623 IDAUniProtprotein targeting to vacuole1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005484 IDA, IMP, TASIEA, UniProtSNAP receptor activity1 2 3
GO:0000149 IBAUniProtSNARE binding1
GO:0005515 IPIGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IDA, IEA, UniProtmembrane1
GO:0005794 ISMGene OntologyGolgi apparatus1
GO:0016021 IBAUniProtintegral component of membrane1
GO:0031201 IBAUniProtSNARE complex1
GO:0031902 IEAUniProtlate endosome membrane1
GO:0005770 IDA, TAS, UniProtlate endosome1 2
GO:0030140 IDA, TAS, UniProttrans-Golgi network transport vesicle1 2

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000727Target SNARE coiled-coil homology domain
IPR006012Syntaxin/epimorphin, conserved site
IPR006011Syntaxin, N-terminal domain
IPR010989SNARE

Mapman id Description
22.7.1.2.Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP2-group component
No SignalP domains detected for this gene.