Gene: AT5G15490 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G15490
Transcript Identifier
AT5G15490.1
Gene Type
Coding gene
Location
Chr5 : 5027872-5029314 : negative

Family

Gene family
HOM04M001024
(136 genes in 29 species)
specific family
Subfamily
ORTHO04M000990
(124 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
UDP-glucose 6-dehydrogenase family protein
Curated Summary
Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD2 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides.
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Identifiers

Type Value
full_nameUDP-glucose dehydrogenase 3
symbolUGD3
tidAT5G15490.1
UniProtQ9LF33

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAGene Ontologyoxidation-reduction process1
GO:0006065 IDA, IEA, UniProtUDP-glucuronate biosynthetic process1 2
GO:0005975 IGIUniProtcarbohydrate metabolic process1
GO:0052546 IGIUniProtcell wall pectin metabolic process1
GO:0006024 IBAUniProtglycosaminoglycan biosynthetic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016616 IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287 IEAUniProtNAD binding1
GO:0003979 IDA, IGI, ISSIEA, UniProtUDP-glucose 6-dehydrogenase activity1 2 3

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 ISMGene Ontologycytoplasm1
GO:0005618 IDAUniProtcell wall1
GO:0005634 IDAUniProtnucleus1
GO:0005829 IDAUniProtcytosol1
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT5G39320

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014027UDP-glucose/GDP-mannose dehydrogenase, C-terminal
IPR014026UDP-glucose/GDP-mannose dehydrogenase, dimerisation
IPR001732UDP-glucose/GDP-mannose dehydrogenase, N-terminal
IPR028356UDP-glucose 6-dehydrogenase, eukaryotic type
IPR017476UDP-glucose/GDP-mannose dehydrogenase
IPR0089276-phosphogluconate dehydrogenase C-terminal domain-like
IPR016040NAD(P)-binding domain

Mapman id Description
3.13.3.1.Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid biosynthesis.UDP-D-glucose 6-dehydrogenase
No SignalP domains detected for this gene.