Gene: AT5G06070 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G06070
Transcript Identifier
AT5G06070.1
Gene Type
Coding gene
Location
Chr5 : 1828426-1829106 : negative

Family

Gene family
HOM04M000501
(236 genes in 26 species)
specific family
Subfamily
ORTHO04M000726
(151 genes in 26 species)
specific family

Descriptions

Description
C2H2 and C2HC zinc fingers superfamily protein
Curated Summary
Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus.
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Identifiers

Type Value
AliasRAB
full_nameRABBIT EARS
symbolRBE
tidAT5G06070.1
UniProtQ9LHS9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0009934 NASGene Ontologyregulation of meristem structural organization1
GO:0030154 IEAUniProtcell differentiation1
GO:0006355 TASUniProtregulation of transcription, DNA-templated1
GO:0048441 IMPUniProtpetal development1
GO:0009409 IEPUniProtresponse to cold1
GO:0009908 IEAPLAZA Tree-based Orthologyflower developmentAT3G23130
GO:0010229 IEAPLAZA Tree-based Orthologyinflorescence developmentLOC_Os04g08600
GO:0045892 IEAPLAZA Tree-based Orthologynegative regulation of transcription, DNA-templatedAT3G23130
GO:0051973 IEAPLAZA Tree-based Orthologypositive regulation of telomerase activityAT3G09290
GO:0009755 IEAPLAZA Tree-based Orthologyhormone-mediated signaling pathwayAT3G23130
GO:0042127 IEAPLAZA Tree-based Orthologyregulation of cell proliferationAT3G23130
GO:0090691 IEAPLAZA Tree-based Orthologyformation of plant organ boundaryAT3G23130
GO:0008361 IEAPLAZA Tree-based Orthologyregulation of cell sizeAT3G23130
GO:0010093 IEAPLAZA Tree-based Orthologyspecification of floral organ identityAT3G23130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEA, ISS, UniProtnucleic acid binding1 2
GO:0008270 ISSGene Ontologyzinc ion binding1
GO:0046872 IEAUniProtmetal ion binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0003677 IEAPLAZA Tree-based OrthologyDNA bindingAT3G23130
GO:0008135 IEAPLAZA Tree-based Orthologytranslation factor activity, RNA bindingLOC_Os04g08600

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, UniProtnucleus1 2
GO:0005739 IEAPLAZA Tree-based OrthologymitochondrionLOC_Os04g08600
GO:0009536 IEAPLAZA Tree-based OrthologyplastidLOC_Os04g08600

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013087Zinc finger C2H2-type

Mapman id Description
15.5.15.RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)
No SignalP domains detected for this gene.