Gene: AT5G05580 (Arabidopsis thaliana)

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Gene Identifier
AT5G05580
Transcript Identifier
AT5G05580.2
Gene Type
Coding gene
Location
Chr5 : 1664331-1666190 : positive

Family

Gene family
HOM04M000625
(200 genes in 29 species)
specific family
Subfamily
ORTHO04M001234
(105 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
fatty acid desaturase 8
Curated Summary
Encodes a temperature sensitive plastidic fatty acid desaturase.
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Identifiers

Type Value
AliasAtFAD8
symbolFAD8
tidAT5G05580.2
UniProtF4K0R2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006629 IEAUniProtlipid metabolic process1
GO:0055114 IEA, IMPGene Ontologyoxidation-reduction process1 2
GO:0006636 IEAUniProtunsaturated fatty acid biosynthetic process1
GO:0006633 IMPUniProtfatty acid biosynthetic process1
GO:0009266 IEPGene Ontologyresponse to temperature stimulus1
GO:0080167 IEAPLAZA Tree-based Orthologyresponse to karrikinAT2G29980
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT3G11170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016717 IEAUniProtoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1
GO:0042389 IMPUniProtomega-3 fatty acid desaturase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 ISS, ISMUniProtchloroplast1 2
GO:0016021 IEAUniProtintegral component of membrane1
GO:0031969 IEAUniProtchloroplast membrane1
GO:0009941 IDAUniProtchloroplast envelope1
GO:0005783 IEAPLAZA Tree-based Orthologyendoplasmic reticulumSolyc06g007130.2
GO:0042170 IEAPLAZA Integrative Orthologyplastid membraneAT3G11170

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005804Fatty acid desaturase domain
IPR021863Fatty acid desaturase, N-terminal

Mapman id Description
5.1.7.3.Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.omega-3/omega-6 fatty acid desaturase (FAD2/3/6-8)
No SignalP domains detected for this gene.