Gene: AT5G05280 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G05280
Transcript Identifier
AT5G05280.1
Gene Type
Coding gene
Location
Chr5 : 1565509-1566039 : negative

Family

Gene family
HOM04M000012
(2892 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
RING/U-box superfamily protein
Curated Summary
Encodes a RING-finger E3 ligase protein that controls anther dehiscence by positively regulating the expression of DAD1 in the jasmonic acid biosynthesis pathway.
Show more...

Identifiers

Type Value
AliasDAF,DEFECTIVE IN ANTHER DEHISCENCE1- ( DAD1-) Activating Factor
tidAT5G05280.1
UniProtQ9FLC6

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567 IDA, IEAGene Ontologyprotein ubiquitination1 2
GO:0043161 IBAGene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0009555 IMPGene Ontologypollen development1
GO:0009901 IMPGene Ontologyanther dehiscence1
GO:0048443 IMPGene Ontologystamen development1
GO:0080141 IMPGene Ontologyregulation of jasmonic acid biosynthetic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270 IEA, ISSGene Ontologyzinc ion binding1 2
GO:0061630 IBAGene Ontologyubiquitin protein ligase activity1
GO:0004842 IDAGene Ontologyubiquitin-protein transferase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAGene Ontologyintegral component of membrane1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
19.2.2.1.5.3.3.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class E3 ligase
No SignalP domains detected for this gene.