Gene: AT5G02250 (Arabidopsis thaliana)

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Gene Identifier
AT5G02250
Transcript Identifier
AT5G02250.1
Gene Type
Coding gene
Location
Chr5 : 454902-459063 : positive

Family

Gene family
HOM04M004719
(40 genes in 29 species)
specific family
Subfamily
ORTHO04M007592
(33 genes in 29 species)
specific family

Descriptions

Description
Ribonuclease II/R family protein
Curated Summary
Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.
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Identifiers

Type Value
AliasATMTRNASEII,ARABIDOPSIS THALIANA MITOCHONDRIAL RNASE II,RNR1,ribonucleotide reductase 1
full_nameEMBRYO DEFECTIVE 2730
symbolEMB2730
tidAT5G02250.1
UniProtQ6NQJ6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006401 IBAUniProtRNA catabolic process1
GO:0009793 NASGene Ontologyembryo development ending in seed dormancy1
GO:0006364 IMPUniProtrRNA processing1
GO:0009658 IMPUniProtchloroplast organization1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723 IEA, ISS, UniProtRNA binding1 2
GO:0004540 ISSGene Ontologyribonuclease activity1
GO:0008859 IEAUniProtexoribonuclease II activity1
GO:0000175 IDAUniProt3'-5'-exoribonuclease activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000178 IBAUniProtexosome (RNase complex)1
GO:0000932 IBAUniProtP-body1
GO:0005739 IDAUniProtmitochondrion1
GO:0009507 IDAUniProtchloroplast1

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR012340Nucleic acid-binding, OB-fold

Mapman id Description
16.12.1.2.RNA processing.organelle machinery.ribonuclease activities.exoribonuclease (RNase R)
No SignalP domains detected for this gene.