Gene: AT4G34640 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G34640
Transcript Identifier
AT4G34640.1
Gene Type
Coding gene
Location
Chr4 : 16538489-16541655 : positive

Family

Gene family
HOM04M003160
(53 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
squalene synthase 1
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Identifiers

Type Value
AliasERG9
symbolSQS1
tidAT4G34640.1
UniProtP53799

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006696 IEAUniProtergosterol biosynthetic process1
GO:0009058 IEAInterProbiosynthetic process
GO:0008610 IEAInterProlipid biosynthetic process
GO:0008299 IEAUniProtisoprenoid biosynthetic process1
GO:0045338 IBAUniProtfarnesyl diphosphate metabolic process1
GO:0055114 IEAGene Ontologyoxidation-reduction process1
GO:0016126 TASUniProtsterol biosynthetic process1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004310 IDA, IEA, ISS, UniProtfarnesyl-diphosphate farnesyltransferase activity1 2
GO:0051996 IDA, IEAUniProtsqualene synthase activity1
GO:0016740 IEAInterProtransferase activity
GO:0016765 IEAInterProtransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016491 IEAUniProtoxidoreductase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAUniProtintegral component of membrane1
GO:0005783 IDAUniProtendoplasmic reticulum1
GO:0005886 IDAUniProtplasma membrane1
GO:0005789 IDA, TAS, UniProtendoplasmic reticulum membrane1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033904Trans-Isoprenyl Diphosphate Synthases, head-to-head
IPR008949Isoprenoid synthase domain
IPR002060Squalene/phytoene synthase
IPR019845Squalene/phytoene synthase, conserved site
IPR006449Farnesyl-diphosphate farnesyltransferase

Mapman id Description
9.1.5.1.Secondary metabolism.terpenoids.cycloartenol biosynthesis.squalene synthase
No SignalP domains detected for this gene.