Gene: AT4G28470 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G28470
Transcript Identifier
AT4G28470.1
Gene Type
Coding gene
Location
Chr4 : 14067082-14072357 : negative

Family

Gene family
HOM04M002394
(67 genes in 29 species)
specific family
Subfamily
ORTHO04M003984
(50 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
26S proteasome regulatory subunit S2 1B
Curated Summary
encoding the RPN subunits of the 26S proteasome
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Identifiers

Type Value
AliasATRPN1B
symbolRPN1B
tidAT4G28470.1
UniProtQ6XJG8

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042176 IEAUniProtregulation of protein catabolic process1
GO:0030163 TASUniProtprotein catabolic process1
GO:0043161 IBAUniProtproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0018279 IBAUniProtprotein N-linked glycosylation via asparagine
GO:0006511 IEAPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT2G20580
GO:0051726 IEAPLAZA Integrative Orthologyregulation of cell cycleAT2G20580
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT2G20580
GO:0045087 IEAPLAZA Integrative Orthologyinnate immune responseAT2G20580

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030234 IEAUniProtenzyme regulator activity1
GO:0005488 IEAInterProbinding
GO:0004579 IBAUniProtdolichyl-diphosphooligosaccharide-protein glycotransferase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G20580
GO:0043130 IEAPLAZA Integrative Orthologyubiquitin bindingAT2G20580

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000502 IDA, IEA, UniProtproteasome complex1
GO:0005634 IBA, ISM, UniProtnucleus1
GO:0008540 TASUniProtproteasome regulatory particle, base subcomplex1
GO:0034515 IBAUniProtproteasome storage granule
GO:0005783 IDAUniProtendoplasmic reticulum
GO:0016021 IEAUniProtintegral component of membrane
GO:0008250 IBAUniProtoligosaccharyltransferase complex
GO:0009505 IDAUniProtplant-type cell wall
GO:0005886 IDAUniProtplasma membrane
GO:0005774 IDAUniProtvacuolar membrane
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G20580
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT2G20580
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT2G20580
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G20580

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011989Armadillo-like helical
IPR01664326S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit
IPR002015Proteasome/cyclosome repeat
IPR016024Armadillo-type fold

Mapman id Description
19.2.6.2.2.1.Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN1
No SignalP domains detected for this gene.