Gene: AT4G28450 (Arabidopsis thaliana)

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Gene Identifier
AT4G28450
Transcript Identifier
AT4G28450.1
Gene Type
Coding gene
Location
Chr4 : 14061724-14064582 : negative

Family

Gene family
HOM04M004699
(40 genes in 29 species)
specific family

Descriptions

Description
WD repeat and SOF domain-containing protein 1
Curated Summary
This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase
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Identifiers

Type Value
tidAT4G28450.1
UniProtQ93VK1

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IPI, IEAGene Ontologyprotein binding1
GO:0000166 ISSGene Ontologynucleotide binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0005834 ISSGene Ontologyheterotrimeric G-protein complex1
GO:0080008 IPIGene OntologyCul4-RING E3 ubiquitin ligase complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR013979Translation initiation factor, beta propellor-like domain
IPR007287Sof1-like protein
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
17.1.3.2.1.8.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (Sof1)
No SignalP domains detected for this gene.