Gene: AT4G24670 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G24670
Transcript Identifier
AT4G24670.2
Gene Type
Coding gene
Location
Chr4 : 12727940-12730694 : negative

Family

Gene family
HOM04M000955
(143 genes in 27 species)
specific family
Subfamily
ORTHO04M000862
(135 genes in 27 species)
specific family

Descriptions

Description
tryptophan aminotransferase related 2
Curated Summary
Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.
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Identifiers

Type Value
symbolTAR2
tidAT4G24670.2
UniProtQ94A02

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009851 IEAUniProtauxin biosynthetic process1
GO:0009684 IGIGene Ontologyindoleacetic acid biosynthetic process1
GO:0009723 IGIUniProtresponse to ethylene1
GO:0009793 IGIGene Ontologyembryo development ending in seed dormancy1
GO:0009908 IGIUniProtflower development1
GO:0009958 IGIUniProtpositive gravitropism1
GO:0010078 IGIUniProtmaintenance of root meristem identity1
GO:0010087 IGIUniProtphloem or xylem histogenesis1
GO:0010588 IGIGene Ontologycotyledon vascular tissue pattern formation1
GO:0048367 IGIUniProtshoot system development1
GO:0048467 IGIUniProtgynoecium development1
GO:0048825 IGIGene Ontologycotyledon development1
GO:0080022 IGIGene Ontologyprimary root development1
GO:0042742 IGIUniProtdefense response to bacterium1
GO:0043562 IMPUniProtcellular response to nitrogen levels1 2
GO:0048527 IMPUniProtlateral root development1 2
GO:0048366 IEAPLAZA Tree-based Orthologyleaf developmentAT1G70560
GO:0009926 IEAPLAZA Tree-based Orthologyauxin polar transportAT1G70560
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT1G70560
GO:0009641 IEAPLAZA Tree-based Orthologyshade avoidanceAT1G70560

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAInterProcatalytic activity
GO:0016846 IEA, ISS, UniProtcarbon-sulfur lyase activity1 2
GO:0050362 ISSUniProtL-tryptophan:2-oxoglutarate aminotransferase activity1
GO:0080097 ISSUniProtL-tryptophan:pyruvate aminotransferase activity1
GO:0004838 IEAPLAZA Tree-based OrthologyL-tyrosine:2-oxoglutarate aminotransferase activityAT1G70560
GO:0047312 IEAPLAZA Tree-based OrthologyL-phenylalanine:pyruvate aminotransferase activityAT1G70560
GO:0050048 IEAPLAZA Tree-based OrthologyL-leucine:2-oxoglutarate aminotransferase activityAT1G70560
GO:0004021 IEAPLAZA Tree-based OrthologyL-alanine:2-oxoglutarate aminotransferase activityAT1G70560
GO:0080100 IEAPLAZA Tree-based OrthologyL-glutamine:2-oxoglutarate aminotransferase activityAT1G70560
GO:0080099 IEAPLAZA Tree-based OrthologyL-methionine:2-oxoglutarate aminotransferase activityAT1G70560
GO:0080098 IEAPLAZA Tree-based OrthologyL-tyrosine:pyruvate aminotransferase activityAT1G70560
GO:0080130 IEAPLAZA Tree-based OrthologyL-phenylalanine:2-oxoglutarate aminotransferase activityAT1G70560
GO:0030170 IEAPLAZA Tree-based Orthologypyridoxal phosphate bindingAT1G70560

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAUniProtintegral component of membrane1
GO:0005789 IDAUniProtendoplasmic reticulum membrane1 2
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmAT1G70560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015422Pyridoxal phosphate-dependent transferase, subdomain 2
IPR006947EGF-like, alliinase
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR006948Alliinase, C-terminal
IPR015424Pyridoxal phosphate-dependent transferase

Mapman id Description
11.2.1.1.1.Phytohormone action.auxin.biosynthesis.indole-3-pyruvic acid (IPyA) pathway.tryptophan aminotransferase
No SignalP domains detected for this gene.