Gene: AT4G22140 (Arabidopsis thaliana)

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Gene Identifier
AT4G22140
Transcript Identifier
AT4G22140.2
Gene Type
Coding gene
Location
Chr4 : 11728093-11730230 : negative

Family

Gene family
HOM04M001175
(121 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
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Identifiers

Type Value
full_nameEARLY BOLTING IN SHORT DAYS
symbolEBS
tidAT4G22140.2
UniProtF4JL28-2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006342 IBAUniProtchromatin silencing1
GO:0006355 IMP, ISS, UniProtregulation of transcription, DNA-templated1
GO:0031507 IBAUniProtheterochromatin assembly1
GO:0009845 IMPUniProtseed germination1
GO:0009911 IGIGene Ontologypositive regulation of flower development1
GO:0006325 IMPUniProtchromatin organization
GO:0016569 IEAUniProtcovalent chromatin modification
GO:0009908 IEAUniProtflower development
GO:0035067 IMPUniProtnegative regulation of histone acetylation
GO:0048579 IMPUniProtnegative regulation of long-day photoperiodism, flowering
GO:0009791 IMPUniProtpost-embryonic development
GO:2000028 IMPUniProtregulation of photoperiodism, flowering
GO:0006351 IEAUniProttranscription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003682 IBA, IEA, UniProtchromatin binding1
GO:0003677 ISSGene OntologyDNA binding1
GO:0046872 IEAUniProtmetal ion binding
GO:0035064 IDAUniProtmethylated histone binding
GO:0000976 IDAUniProttranscription regulatory region sequence-specific DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000785 IBAUniProtchromatin1
GO:0005634 IDA, ISM, UniProtnucleus1
GO:0005677 IBAUniProtchromatin silencing complex1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001025Bromo adjacent homology (BAH) domain
IPR019787Zinc finger, PHD-finger
IPR019786Zinc finger, PHD-type, conserved site
IPR001965Zinc finger, PHD-type
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
12.3.5.2.1.Chromatin organisation.histone modifications.histone ubiquitination.BAH-EMF1 Polycomb gene silencing complex.component BAH
No SignalP domains detected for this gene.