PLAZA 4.0 Monocots gene overview : AT4G15610

Gene: AT4G15610 (Arabidopsis thaliana)

Overview

Gene Identifier: AT4G15610
Transcript Identifier: AT4G15610.1
Gene Type: Coding gene
Location: Chr4 : 8909162-8910641 : positive

Family

Gene family: HOM04M005662
(35 genes in 24 species)
specific family

Descriptions

Description: Uncharacterized protein family (UPF0497)

Identifiers

Type	Value
Alias	CASPL1D1,CASP-like protein 1D1
tid	AT4G15610.1
UniProt	Q9FE29

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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View

Browse

...the gene in IGV.js, a genome browser

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016021	IEA	Gene Ontology	integral component of membrane	1
GO:0005794	IDA	Gene Ontology	Golgi apparatus	1
GO:0005768	IDA	Gene Ontology	endosome	1
GO:0005802	IDA	Gene Ontology	trans-Golgi network	1
GO:0005886	IDA	Gene Ontology	plasma membrane	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006702	Domain of unknown function DUF588
IPR006459	Casparian strip membrane protein

Mapman id	Description
35.1	not assigned.annotated

No SignalP domains detected for this gene.