Gene: AT4G05000 (Arabidopsis thaliana)

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Gene Identifier
AT4G05000
Transcript Identifier
AT4G05000.2
Gene Type
Coding gene
Location
Chr4 : 2563953-2564585 : positive

Family

Gene family
HOM04M005107
(38 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Vacuolar protein sorting-associated protein VPS28 family protein
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Identifiers

Type Value
symbolVPS28-2
tidAT4G05000.2
UniProtQ9S9T7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006810 ISSGene Ontologytransport1
GO:0043328 IBAUniProtprotein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215 ISSGene Ontologytransporter activity1
GO:0032403 IBAUniProtprotein complex binding1
GO:0005515 IPIGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000813 ISS, IBA, UniProtESCRT I complex1 2
GO:0005634 ISMGene Ontologynucleus1
GO:0005802 IEAPLAZA Integrative Orthologytrans-Golgi networkAT4G21560
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT4G21560

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007143Vacuolar protein sorting-associated, VPS28
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminal
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminal

Mapman id Description
22.5.4.1.2.Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.component VPS28
No SignalP domains detected for this gene.