Gene: AT4G02195 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT4G02195
- Transcript Identifier
- AT4G02195.1
- Gene Type
- Coding gene
- Location
- Chr4 : 970099-972192 : negative
Family
- Gene family
Descriptions
- Description
-
syntaxin of plants 42
- Curated Summary
-
Encodes a member of SYP4 Gene Family that is a plant ortholog of the Tlg2/syntaxin16 Qa-SNARE. Together with SYP43, it regulates the secretory and vacuolar transport pathways in the post-Golgi network and maintains the morphology of the Golgi apparatus and TGN and is required for extracellular resistance responses to a fungal pathogen.
Identifiers
Type | Value |
---|---|
Alias | ATSYP42,ATTLG2B,TLG2B |
symbol | SYP42 |
tid | AT4G02195.1 |
UniProt | Q9SWH4 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
Create
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...all colinear gene pairs.