Gene: AT4G00540 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G00540
Transcript Identifier
AT4G00540.1
Gene Type
Coding gene
Location
Chr4 : 234597-237356 : negative

Family

Gene family
HOM04M000112
(760 genes in 29 species)
specific family

Descriptions

Description
myb domain protein 3r2
Curated Summary
Encodes a putative c-myb-like transcription factor. Member of a class of domain proteins containing structural features of the vertebrate c-Myb proto-oncoprotein, including the presence of three Myb motifs (R1,R2,R3).
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Identifiers

Type Value
AliasATMYB3R2,myb domain protein 3r2,MYB3R-2,MYB DOMAIN PROTEIN 3R2,PC-MYB2,C-MYB-LIKE TRANSCRIPTION FACTOR 3R-2
symbolMYB3R2
tidAT4G00540.1
UniProtQ9SPN3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter1
GO:0030154 IBAUniProtcell differentiation1
GO:0006355 ISSGene Ontologyregulation of transcription, DNA-templated1
GO:0042752 IMPUniProtregulation of circadian rhythm1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, ISS, UniProtDNA binding1 2
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding1
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting1
GO:0043565 ISS, IBA, UniProtsequence-specific DNA binding1
GO:0044212 IBAUniProttranscription regulatory region DNA binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.