Gene: AT4G00180 (Arabidopsis thaliana)

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Gene Identifier
AT4G00180
Transcript Identifier
AT4G00180.1
Gene Type
Coding gene
Location
Chr4 : 72804-75089 : negative

Family

Gene family
HOM04M000551
(221 genes in 25 species)
specific family
Subfamily
ORTHO04M000548
(181 genes in 25 species)
specific family

Descriptions

Description
Plant-specific transcription factor YABBY family protein
Curated Summary
YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades.
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Identifiers

Type Value
full_nameYABBY3
symbolYAB3
tidAT4G00180.1
UniProtQ9XFB1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007275 IEAUniProtmulticellular organism development1
GO:0006355 TASUniProtregulation of transcription, DNA-templated1
GO:0010154 IMPUniProtfruit development1
GO:0010158 IGIUniProtabaxial cell fate specification1
GO:0009944 IMPUniProtpolarity specification of adaxial/abaxial axis1 2
GO:1902183 IMPUniProtregulation of shoot apical meristem development1 2
GO:2000024 IMPUniProtregulation of leaf development1 2
GO:0010254 IEAPLAZA Tree-based Orthologynectary developmentAT1G69180
GO:0048481 IEAPLAZA Tree-based Orthologyplant ovule developmentAT1G23420
GO:0010431 IEAPLAZA Tree-based Orthologyseed maturationAT1G69180
GO:0090706 IEAPLAZA Integrative Orthologyspecification of plant organ positionAT2G45190
GO:0071215 IEAPLAZA Tree-based Orthologycellular response to abscisic acid stimulusAT1G69180
GO:0048530 IEAPLAZA Tree-based Orthologyfruit morphogenesisSolyc11g071810.1
GO:0045165 IEAPLAZA Integrative Orthologycell fate commitmentAT2G45190
GO:0048366 IEAPLAZA Tree-based Orthologyleaf developmentLOC_Os03g11600
GO:0009909 IEAPLAZA Integrative Orthologyregulation of flower developmentAT2G45190
GO:0009737 IEAPLAZA Tree-based Orthologyresponse to abscisic acidAT1G69180
GO:0048440 IEAPLAZA Tree-based Orthologycarpel developmentLOC_Os03g11600
GO:0009735 IEAPLAZA Tree-based Orthologyresponse to cytokininAT1G69180
GO:0009933 IEAPLAZA Integrative Orthologymeristem structural organizationAT2G45190
GO:0048479 IEAPLAZA Tree-based Orthologystyle developmentAT1G69180
GO:0048833 IEAPLAZA Tree-based Orthologyspecification of floral organ numberLOC_Os07g06620
GO:0010094 IEAPLAZA Tree-based Orthologyspecification of carpel identityLOC_Os03g11600
GO:0010093 IEAPLAZA Integrative Orthologyspecification of floral organ identityAT2G45190
GO:0010582 IEAPLAZA Tree-based Orthologyfloral meristem determinacyAT1G69180
GO:0010450 IEAPLAZA Integrative Orthologyinflorescence meristem growthAT2G45190
GO:0010022 IEAPLAZA Tree-based Orthologymeristem determinacyLOC_Os03g11600

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding1
GO:0046872 IEAUniProtmetal ion binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1
GO:0005515 IPIGene Ontologyprotein binding1
GO:0045735 IEAPLAZA Tree-based Orthologynutrient reservoir activityAT1G69180

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1 2

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009071High mobility group box domain
IPR006780YABBY protein

Mapman id Description
15.5.1.4.RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (YABBY)
No SignalP domains detected for this gene.