PLAZA 4.0 Monocots gene overview : AT3G62830

Gene: AT3G62830 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G62830
Transcript Identifier: AT3G62830.1
Gene Type: Coding gene
Location: Chr3 : 23232539-23235353 : positive

Family

Gene family: HOM04M000604
(206 genes in 29 species)
specific family
Subfamily: ORTHO04M001091
(116 genes in 29 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: NAD(P)-binding Rossmann-fold superfamily protein

Curated Summary: encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.

Identifiers

Type	Value
symbol	AUD1
tid	AT3G62830.1
UniProt	Q9LZI2

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009225	ISS	Gene Ontology	nucleotide-sugar metabolic process	1
GO:0033320	IEA	UniProt	UDP-D-xylose biosynthetic process	1
GO:0019305	ISS	UniProt	dTDP-rhamnose biosynthetic process	1
GO:0042732	IDA	UniProt	D-xylose metabolic process	1

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003824	ISS	Gene Ontology	catalytic activity	1
GO:0070403	IBA	UniProt	NAD+ binding	1
GO:0008460	ISS	UniProt	dTDP-glucose 4,6-dehydratase activity	1
GO:0048040	IDA	UniProt	UDP-glucuronate decarboxylase activity	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005794	IDA, ISM,	UniProt	Golgi apparatus	1 2
GO:0016021	IEA	UniProt	integral component of membrane	1
GO:0032580	IEA	UniProt	Golgi cisterna membrane	1
GO:0016020	TAS	UniProt	membrane	1
GO:0000139	IDA	UniProt	Golgi membrane	1
GO:0005886	IDA	UniProt	plasma membrane	1
GO:0005829	RCA	Gene Ontology	cytosol	1
GO:0005768	IDA	UniProt	endosome	1
GO:0005802	IDA	UniProt	trans-Golgi network	1
GO:0005773	IEA	PLAZA Integrative Orthology	vacuole	AT2G47650
GO:0005774	IEA	PLAZA Integrative Orthology	vacuolar membrane	AT2G47650

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016040	NAD(P)-binding domain

Mapman id	Description
3.13.5.1	.Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-xylose biosynthesis.UDP-D-glucuronic acid decarboxylase

No SignalP domains detected for this gene.