Gene: AT3G62770 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G62770
Transcript Identifier
AT3G62770.1
Gene Type
Coding gene
Location
Chr3 : 23218858-23221110 : negative

Family

Gene family
HOM04M000910
(150 genes in 29 species)
specific family
Subfamily
ORTHO04M001470
(95 genes in 29 species)
specific family

Descriptions

Description
Transducin/WD40 repeat-like superfamily protein
Curated Summary
Required for autophagosome formation during nutrient deprivation and senescence.
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Identifiers

Type Value
AliasATG18a,autophagy 18a,PEUP2,PEROXISOME UNUSUAL POSITIONING 2
full_nameautophagy 18a
symbolAtATG18a
tidAT3G62770.1
UniProtQ93VB2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015031 IEAGene Ontologyprotein transport1
GO:0006914 IMPGene Ontologyautophagy1
GO:0010150 IMPGene Ontologyleaf senescence1
GO:0042594 IEP, IMPGene Ontologyresponse to starvation1 2
GO:0006979 IEPGene Ontologyresponse to oxidative stress1
GO:0006970 IEPGene Ontologyresponse to osmotic stress1
GO:0009414 IEP, IMPGene Ontologyresponse to water deprivation1 2
GO:0009651 IEPGene Ontologyresponse to salt stress1
GO:0050832 IEPGene Ontologydefense response to fungus1
GO:0010508 IMPGene Ontologypositive regulation of autophagy1 2

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IPI, IEAGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISMGene Ontologynucleus1 2
GO:0005774 IEAGene Ontologyvacuolar membrane1
GO:0034045 IEAGene Ontologypre-autophagosomal structure membrane1
GO:0005829 IDAGene Ontologycytosol1

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR017986WD40-repeat-containing domain

Mapman id Description
19.3.2.1.3.Protein homeostasis.autophagy.ATG9-2-18 membrane shuttling complex.components.component ATG18
No SignalP domains detected for this gene.