Gene: AT3G62440 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G62440
Transcript Identifier
AT3G62440.1
Gene Type
Coding gene
Location
Chr3 : 23096104-23097726 : negative

Family

Gene family
HOM04M000879
(153 genes in 6 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
F-box/RNI-like superfamily protein
Curated Summary
Encodes an F-box protein which is predominantly expressed in flower tissues and interacts with ASK19 protein. Mutations in this gene suggest it acts as a negative regulator of endothecial secondary wall thickening in anthers.
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Identifiers

Type Value
full_namesecondary wall thickening-associated F-box 1
symbolSAF1
tidAT3G62440.1
UniProtQ9LZP6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009901 IMPGene Ontologyanther dehiscence1
GO:0006511 IEAPLAZA Tree-based Orthologyubiquitin-dependent protein catabolic processAT5G53840
GO:0010588 IEAPLAZA Tree-based Orthologycotyledon vascular tissue pattern formationAT5G22720

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IPI, IEAGene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0031225 IEAPLAZA Integrative Orthologyanchored component of membraneAT3G58890
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT5G25860
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT3G60040
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT4G00320
GO:0009507 IEAPLAZA Tree-based OrthologychloroplastAT5G18770

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR032675Leucine-rich repeat domain, L domain-like
IPR013101Leucine-rich repeat 2
IPR006566FBD domain
IPR001810F-box domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.