PLAZA 4.0 Monocots gene overview : AT3G61250

Gene: AT3G61250 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G61250
Transcript Identifier: AT3G61250.1
Gene Type: Coding gene
Location: Chr3 : 22671306-22672551 : positive

Family

Gene family: HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type: Block duplicate

Descriptions

Description: myb domain protein 17

Curated Summary: LATE MERISTEM IDENTITY2 (LMI2) is a target of the meristem identity regulator LEAFY (LFY). Has a role in the meristem identity transition from vegetative growth to flowering. Member of the R2R3 factor gene family.

Identifiers

Type	Value
Alias	AtMYB17,myb domain protein 17,LMI2,LATE MERISTEM IDENTITY2
symbol	MYB17
tid	AT3G61250.1
UniProt	Q9M2D9

Toolbox

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...the local gene organization for homologous genes.
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...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006357	IBA	UniProt	regulation of transcription from RNA polymerase II promoter	1
GO:0030154	IBA	UniProt	cell differentiation	1
GO:0009751	IEP	UniProt	response to salicylic acid	1
GO:0009753	IEP	UniProt	response to jasmonic acid	1
GO:0009909	IMP	UniProt	regulation of flower development	1
GO:0006355	ISS	Gene Ontology	regulation of transcription, DNA-templated	1
GO:0009908	IEA	UniProt	flower development
GO:0006351	IEA	UniProt	transcription, DNA-templated

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003677	ISS, IEA	Gene Ontology	DNA binding	1
GO:0000981	IBA	UniProt	RNA polymerase II transcription factor activity, sequence-specific DNA binding	1
GO:0001135	IBA	UniProt	transcription factor activity, RNA polymerase II transcription factor recruiting	1
GO:0043565	IBA	UniProt	sequence-specific DNA binding	1
GO:0044212	IBA	UniProt	transcription regulatory region DNA binding	1
GO:0003700	ISS	UniProt	transcription factor activity, sequence-specific DNA binding	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	IBA, ISM,	UniProt	nucleus	1 2

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox domain-like

Mapman id	Description
15.5.2.1	.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)

No SignalP domains detected for this gene.