Gene: AT3G60500 (Arabidopsis thaliana)

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Gene Identifier
AT3G60500
Transcript Identifier
AT3G60500.1
Gene Type
Coding gene
Location
Chr3 : 22354245-22356440 : positive

Family

Gene family
HOM04M003359
(51 genes in 28 species)
specific family

Descriptions

Description
3'-5'-exoribonuclease family protein
Curated Summary
Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.
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Identifiers

Type Value
AliasG3
full_nameECERIFERUM 7
symbolCER7
tidAT3G60500.1
UniProtQ9M209

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006396 IEA, ISS, UniProtRNA processing1 2
GO:0010025 IMPGene Ontologywax biosynthetic process1
GO:0043928 IBAUniProtexonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
GO:0000467 IBAUniProtexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0071028 IBAUniProtnuclear mRNA surveillance
GO:0071042 IBAUniProtnuclear polyadenylation-dependent mRNA catabolic process
GO:0071035 IBAUniProtnuclear polyadenylation-dependent rRNA catabolic process
GO:0071038 IBAUniProtnuclear polyadenylation-dependent tRNA catabolic process
GO:0034427 IBAUniProtnuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034473 IBAUniProtU1 snRNA 3'-end processing
GO:0034475 IBAUniProtU4 snRNA 3'-end processing
GO:0034476 IBAUniProtU5 snRNA 3'-end processing

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000175 ISS, IGIUniProt3'-5'-exoribonuclease activity1 2
GO:0003723 IEA, ISSGene OntologyRNA binding1 2
GO:0017091 IBAUniProtAU-rich element binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000178 IEAUniProtexosome (RNase complex)1
GO:0005737 IDA, ISM, UniProtcytoplasm1 2
GO:0005634 IDAUniProtnucleus1
GO:0000177 IBAUniProtcytoplasmic exosome (RNase complex)
GO:0000176 IBAUniProtnuclear exosome (RNase complex)

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033100Exosome complex component RRP45
IPR027408PNPase/RNase PH domain
IPR015847Exoribonuclease, phosphorolytic domain 2
IPR001247Exoribonuclease, phosphorolytic domain 1
IPR020568Ribosomal protein S5 domain 2-type fold

Mapman id Description
16.8.1.1.5.RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP45
No SignalP domains detected for this gene.