Gene: AT3G55500 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G55500
Transcript Identifier
AT3G55500.1
Gene Type
Coding gene
Location
Chr3 : 20575073-20576102 : negative

Family

Gene family
HOM04M000098
(863 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
expansin A16
Curated Summary
expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
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Identifiers

Type Value
AliasATEXP16,ATEXPA16,expansin A16,ATHEXP ALPHA 1.7,EXP16,EXPANSIN 16
symbolEXPA16
tidAT3G55500.1
UniProtQ9M2S9

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009664 IEAUniProtplant-type cell wall organization1
GO:0009826 ISS, NASGene Ontologyunidimensional cell growth1 2
GO:0009828 ISS, NASGene Ontologyplant-type cell wall loosening1 2
GO:0009831 ISSGene Ontologyplant-type cell wall modification involved in multidimensional cell growth1
GO:0006949 IEPUniProtsyncytium formation1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576 IEA, ISM, UniProtextracellular region1 2
GO:0005618 IEAUniProtcell wall1
GO:0016020 IEAUniProtmembrane1
GO:0009505 IEAPLAZA Integrative Orthologyplant-type cell wallAT2G39700
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT2G39700
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT2G39700

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009009RlpA-like protein, double-psi beta-barrel domain
IPR007117Expansin, cellulose-binding-like domain
IPR007118Expansin/Lol pI
IPR002963Expansin
IPR007112Expansin/pollen allergen, DPBB domain

Mapman id Description
21.4.2.1.Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin
No SignalP domains detected for this gene.