Gene: AT3G55350 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G55350
Transcript Identifier
AT3G55350.1
Gene Type
Coding gene
Location
Chr3 : 20518518-20520690 : positive

Family

Gene family
HOM04M000785
(168 genes in 24 species)
specific family

Descriptions

Description
PIF / Ping-Pong family of plant transposase
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Identifiers

Type Value
tidAT3G55350.1
UniProtQ9M2U3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031936 IEAPLAZA Tree-based Orthologynegative regulation of chromatin silencingAT3G63270

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004518 IEAGene Ontologynuclease activity1
GO:0046872 IEAGene Ontologymetal ion binding1
GO:0003682 IEAPLAZA Tree-based Orthologychromatin bindingAT3G63270
GO:0005515 IEAPLAZA Tree-based Orthologyprotein bindingAT3G63270

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISMGene Ontologynucleus1 2
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneAT5G12010
GO:0005774 IEAPLAZA Tree-based Orthologyvacuolar membraneAT5G12010
GO:0035098 IEAPLAZA Tree-based OrthologyESC/E(Z) complexAT3G63270
GO:0016020 IEAPLAZA Tree-based OrthologymembraneAT5G12010
GO:0035102 IEAPLAZA Tree-based OrthologyPRC1 complexAT3G63270
GO:0009507 IEAPLAZA Tree-based OrthologychloroplastAT5G12010

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR027806Harbinger transposase-derived nuclease domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.