Gene: AT3G55090 (Arabidopsis thaliana)

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Gene Identifier
AT3G55090
Transcript Identifier
AT3G55090.1
Gene Type
Coding gene
Location
Chr3 : 20416342-20418552 : negative

Family

Gene family
HOM04M000042
(1464 genes in 29 species)
specific family
Subfamily
ORTHO04M000604
(172 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
ABC-2 type transporter family protein
Curated Summary
Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).
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Identifiers

Type Value
AliasAtABCG16
full_nameATP-binding cassette G16
symbolABCG16
tidAT3G55090.1
UniProtQ9M2V7

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010208 IGIUniProtpollen wall assembly1 2
GO:0042891 IEAPLAZA Integrative Orthologyantibiotic transportAT3G55130
GO:0007034 IEAPLAZA Integrative Orthologyvacuolar transportAT3G55130
GO:0009624 IEAPLAZA Integrative Orthologyresponse to nematodeAT2G39350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524 IEAUniProtATP binding1
GO:0016887 IEAInterProATPase activity
GO:0042626 IBA, ISS, UniProtATPase activity, coupled to transmembrane movement of substances1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0005886 IBAUniProtplasma membrane1
GO:0016021 IBAUniProtintegral component of membrane1
GO:0005775 IEAPLAZA Integrative Orthologyvacuolar lumenAT3G55130

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013525ABC-2 type transporter
IPR003439ABC transporter-like
IPR017871ABC transporter, conserved site
IPR003593AAA+ ATPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
24.1.3.2.2.Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter
No SignalP domains detected for this gene.