Gene: AT3G54990 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G54990
Transcript Identifier
AT3G54990.1
Gene Type
Coding gene
Location
Chr3 : 20373718-20376522 : negative

Family

Gene family
HOM04M000119
(726 genes in 29 species)
specific family
Subfamily
ORTHO04M000063
(682 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Integrase-type DNA-binding superfamily protein
Curated Summary
Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.
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Identifiers

Type Value
full_nameSCHLAFMUTZE
symbolSMZ
tidAT3G54990.1
UniProtQ6PV68

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEA, ISS, TASGene Ontologyregulation of transcription, DNA-templated1 2 3
GO:0007275 IEA, ISS, UniProtmulticellular organism development1 2
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0009873 IEAUniProtethylene-activated signaling pathway1
GO:0009658 IMPUniProtchloroplast organization1

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 ISS, TAS, IEA, UniProttranscription factor activity, sequence-specific DNA binding1 2
GO:0003677 IEA, TAS, UniProtDNA binding1 2
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G60120

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, IC, ISM, TAS, UniProtnucleus1 2 3 4
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G39250

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001471AP2/ERF domain
IPR031112AP2-like ethylene-responsive transcription factor
IPR016177DNA-binding domain

Mapman id Description
15.5.7.3.RNA biosynthesis.transcriptional regulation.AP2/ERF transcription factor superfamily.transcription factor (AP2)
No SignalP domains detected for this gene.