Gene: AT3G54840 (Arabidopsis thaliana)

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Gene Identifier
AT3G54840
Transcript Identifier
AT3G54840.1
Gene Type
Coding gene
Location
Chr3 : 20318597-20320782 : positive

Family

Gene family
HOM04M000036
(1581 genes in 29 species)
specific family
Subfamily
ORTHO04M004518
(45 genes in 27 species)
specific family

Descriptions

Description
Ras-related small GTP-binding family protein
Curated Summary
Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome.
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Identifiers

Type Value
symbolARA6
tidAT3G54840.1
UniProtQ9CB01

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006897 IEAGene Ontologyendocytosis1
GO:0045022 IMPGene Ontologyearly endosome to late endosome transport1
GO:0006974 IMPUniProtcellular response to DNA damage stimulus
GO:0018131 IGIUniProtoxazole or thiazole biosynthetic process
GO:0009409 IEPUniProtresponse to cold
GO:0009228 IGIUniProtthiamine biosynthetic process
GO:0052837 IBAUniProtthiazole biosynthetic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924 IEA, IDAUniProtGTPase activity1 2
GO:0005525 IEA, ISS, UniProtGTP binding1 2
GO:0005515 IPIGene Ontologyprotein binding1
GO:0005506 IBAUniProtiron ion binding
GO:0016491 IEAUniProtoxidoreductase activity
GO:0019904 IPIUniProtprotein domain specific binding
GO:0042803 IPIUniProtprotein homodimerization activity
GO:0008270 IDAUniProtzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005783 IEAGene Ontologyendoplasmic reticulum1
GO:0005794 ISMGene OntologyGolgi apparatus1
GO:0005886 IEAUniProtplasma membrane1
GO:0009507 IDA, ISMUniProtchloroplast1
GO:0031901 IEAGene Ontologyearly endosome membrane1
GO:0005769 IDAGene Ontologyearly endosome1
GO:0010009 IDAGene Ontologycytoplasmic side of endosome membrane1
GO:0005768 IDAGene Ontologyendosome1
GO:0009941 IDAUniProtchloroplast envelope
GO:0009570 IDAUniProtchloroplast stroma
GO:0005829 IBAUniProtcytosol
GO:0005739 IDAUniProtmitochondrion
GO:0010319 IDAUniProtstromule
GO:0009579 IDAUniProtthylakoid

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001806Small GTPase superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005225Small GTP-binding protein domain

Mapman id Description
22.8.1.6.Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.F-class RAB GTPase
No SignalP domains detected for this gene.