Gene: AT3G51060 (Arabidopsis thaliana)

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Gene Identifier
AT3G51060
Transcript Identifier
AT3G51060.1
Gene Type
Coding gene
Location
Chr3 : 18964606-18966130 : positive

Family

Gene family
HOM04M000833
(160 genes in 27 species)
specific family
Subfamily
ORTHO04M000717
(154 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Lateral root primordium (LRP) protein-like protein
Curated Summary
A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. STY1/STY2 double mutants showed defective style, stigma as well as serrated leaves. Binds to the promoter of YUC4 and YUC8 (binding site ACTCTAC)
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Identifiers

Type Value
AliasAtSTY1,SRS1,SHI RELATED SEQUENCE 1
full_nameSTYLISH 1
symbolSTY1
tidAT3G51060.1
UniProtQ9SD40

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007275 IEAUniProtmulticellular organism development1
GO:0009734 IEAUniProtauxin-activated signaling pathway1
GO:0009851 IEAUniProtauxin biosynthetic process1
GO:0009938 NASGene Ontologynegative regulation of gibberellic acid mediated signaling pathway1
GO:0010051 IGIGene Ontologyxylem and phloem pattern formation1
GO:0048479 IGIGene Ontologystyle development1
GO:0048480 IGIGene Ontologystigma development1
GO:0010252 IGIGene Ontologyauxin homeostasis1
GO:0045893 IDAUniProtpositive regulation of transcription, DNA-templated1
GO:0009733 IEAPLAZA Tree-based Orthologyresponse to auxinAT5G12330
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT5G66350
GO:0009299 IEAPLAZA Tree-based OrthologymRNA transcriptionAT1G19790
GO:0048467 IEAPLAZA Tree-based Orthologygynoecium developmentAT1G75520
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT5G66350
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT5G12330

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700 NASGene Ontologytranscription factor activity, sequence-specific DNA binding1
GO:0046872 IEAUniProtmetal ion binding1
GO:0046982 IPIUniProtprotein heterodimerization activity1
GO:0003677 IDAUniProtDNA binding1
GO:0042803 IEAPLAZA Tree-based Orthologyprotein homodimerization activityAT5G12330

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, ISS, UniProtnucleus1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007818SHI protein family
IPR006510Zinc finger, lateral root primordium type 1
IPR006511SHORT INTERNODES, C-terminal

Mapman id Description
15.5.47.RNA biosynthesis.transcriptional regulation.transcription factor (SRS)
No SignalP domains detected for this gene.