Gene: AT3G46130 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G46130
Transcript Identifier
AT3G46130.1
Gene Type
Coding gene
Location
Chr3 : 16945427-16946376 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Subfamily
ORTHO04M001655
(89 genes in 24 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
myb domain protein 48
Curated Summary
Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.
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Identifiers

Type Value
AliasATMYB48-1,ATMYB48-2,ATMYB48-3,ATMYB48,myb domain protein 48
symbolMYB48
tidAT3G46130.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter1
GO:0030154 IBAUniProtcell differentiation1
GO:0006355 TAS, ISS, UniProtregulation of transcription, DNA-templated1 2
GO:0009751 IEPUniProtresponse to salicylic acid1
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT5G59780
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT5G59780
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT5G59780
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT5G59780
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT5G59780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEA, ISS, UniProtDNA binding1 2
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding1
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting1
GO:0043565 IBAUniProtsequence-specific DNA binding1
GO:0044212 IBAUniProttranscription regulatory region DNA binding1
GO:0003700 ISSUniProttranscription factor activity, sequence-specific DNA binding1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IDA, ISM, UniProtnucleus1 2

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.