Gene: AT3G28857 (Arabidopsis thaliana)

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Gene Identifier
AT3G28857
Transcript Identifier
AT3G28857.1
Gene Type
Coding gene
Location
Chr3 : 10855781-10856313 : negative

Family

Gene family
HOM04M000827
(161 genes in 24 species)
specific family
Subfamily
ORTHO04M003380
(56 genes in 22 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
basic helix-loop-helix (bHLH) DNA-binding family protein
Curated Summary
Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors.
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Identifiers

Type Value
full_namePaclobutrazol Resistance 5
symbolPRE5
tidAT3G28857.1
UniProtQ9LJX1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAUniProttranscription, DNA-templated1
GO:0006355 IEAUniProtregulation of transcription, DNA-templated1
GO:0009740 IEAUniProtgibberellic acid mediated signaling pathway1
GO:0040008 IEAUniProtregulation of growth1
GO:0009416 IEAPLAZA Tree-based Orthologyresponse to light stimulusAT1G26945
GO:0009741 IEAPLAZA Integrative Orthologyresponse to brassinosteroidAT5G39860
GO:0009742 IEAPLAZA Tree-based Orthologybrassinosteroid mediated signaling pathwayAT1G74500
GO:0080113 IEAPLAZA Tree-based Orthologyregulation of seed growthLOC_Os03g07510
GO:0048510 IEAPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT5G39860
GO:0009640 IEAPLAZA Integrative OrthologyphotomorphogenesisAT5G39860
GO:0009826 IEAPLAZA Integrative Orthologyunidimensional cell growthAT5G39860
GO:0010086 IEAPLAZA Tree-based Orthologyembryonic root morphogenesisAT1G74500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983 IEAUniProtprotein dimerization activity1
GO:0005515 IPIGene Ontologyprotein binding1 2

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEA, ISM, UniProtnucleus1
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT5G15160
GO:0005737 IEAPLAZA Tree-based OrthologycytoplasmLOC_Os06g12210

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
15.5.32.RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
No SignalP domains detected for this gene.