Gene: AT3G21240 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G21240
Transcript Identifier
AT3G21240.1
Gene Type
Coding gene
Location
Chr3 : 7454497-7457314 : negative

Family

Gene family
HOM04M000185
(503 genes in 27 species)
specific family
Subfamily
ORTHO04M000924
(130 genes in 27 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Curated Summary
encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.
Show more...

Identifiers

Type Value
AliasAT4CL2
symbol4CL2
tidAT3G21240.1
UniProtQ9S725

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152 IEAUniProtmetabolic process1
GO:0009411 IEPGene Ontologyresponse to UV1
GO:0009611 IEPGene Ontologyresponse to wounding1
GO:0009620 IEPGene Ontologyresponse to fungus1
GO:0009698 TASUniProtphenylpropanoid metabolic process1
GO:0009699 IEAPLAZA Integrative Orthologyphenylpropanoid biosynthetic processAT3G21230

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824 IEAUniProtcatalytic activity
GO:0005524 IEAUniProtATP binding1
GO:0016874 IEAUniProtligase activity1
GO:0016207 IDAUniProt4-coumarate-CoA ligase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 ISMGene Ontologynucleus1
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G51680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR025110AMP-binding enzyme, C-terminal domain
IPR000873AMP-dependent synthetase/ligase

Mapman id Description
7.8.1.1.Coenzyme metabolism.prenylquinone biosynthesis.4-hydroxybenzoate biosynthesis.p-coumarate:CoA ligase
9.2.1.3.Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.4-coumarate:CoA ligase (4CL)
No SignalP domains detected for this gene.