PLAZA 4.0 Monocots gene overview : AT3G21240

Gene: AT3G21240 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3G21240
Transcript Identifier: AT3G21240.1
Gene Type: Coding gene
Location: Chr3 : 7454497-7457314 : negative

Family

Gene family: HOM04M000185
(503 genes in 27 species)
specific family
Subfamily: ORTHO04M000924
(130 genes in 27 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

Descriptions

Curated Summary: encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.

Identifiers

Type	Value
Alias	AT4CL2
symbol	4CL2
tid	AT3G21240.1
UniProt	Q9S725

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	UniProt	metabolic process	1
GO:0009411	IEP	Gene Ontology	response to UV	1
GO:0009611	IEP	Gene Ontology	response to wounding	1
GO:0009620	IEP	Gene Ontology	response to fungus	1
GO:0009698	TAS	UniProt	phenylpropanoid metabolic process	1
GO:0009699	IEA	PLAZA Integrative Orthology	phenylpropanoid biosynthetic process	AT3G21230

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003824	IEA	UniProt	catalytic activity
GO:0005524	IEA	UniProt	ATP binding	1
GO:0016874	IEA	UniProt	ligase activity	1
GO:0016207	IDA	UniProt	4-coumarate-CoA ligase activity	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISM	Gene Ontology	nucleus	1
GO:0005737	IEA	PLAZA Integrative Orthology	cytoplasm	AT1G51680

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR025110	AMP-binding enzyme, C-terminal domain
IPR000873	AMP-dependent synthetase/ligase

Mapman id	Description
7.8.1.1	.Coenzyme metabolism.prenylquinone biosynthesis.4-hydroxybenzoate biosynthesis.p-coumarate:CoA ligase
9.2.1.3	.Secondary metabolism.phenolics.p-coumaroyl-CoA biosynthesis.4-coumarate:CoA ligase (4CL)

No SignalP domains detected for this gene.